IDeA Network for Biomedical Research Excellence (INBRE) Sequencing and Bioinformatics Core (SBC)
The SBC is a collaborative resource that supports hypothesis and discovery-driven genomic studies in five thematic areas: Structure & Function of Biomolecules, Cell and Organism, Pathogens, and Community-Based Participatory Research (CBPR). The SBC’s objectives are to:
o Advance cutting-edge knowledge discovery through innovative bioinformatics analysis techniques, resources, and tools.
o Engage the network in education and training through outreach, mentorships, internships, and symposia.
o Build and maintain research-enabling IT Infrastructure and mechanisms for communication within the network and to the public.
Publications
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B. Wheaton, J. Sena, A. Sundararajan, P. Umale, F. Schilkey and R. Miller.
Identification of regenerative processes in neonatal spinal cord injury in the opossum (Monodelphis domestica): A transcriptomic study
J Comp Neurol, 529(5), 969--986, 2021
INBRET. Lowe, R. Reiss, P. Illescas, C. Davis, M. Connick and J. Sena.
Effect of surface grain boundary density on preosteoblast proliferation on titanium
Mater Res Lett, 8(6), 239--246, 2020
INBREK. Arora, M. Belcaid, M. Lantz, R. Taketa and R. Nichols.
Transcriptome Profile of Nicotinic Receptor-Linked Sensitization of Beta Amyloid Neurotoxicity
Sci Rep, 10(1), 5696, 2020
INBREV. Troselj, D. Pathak and D. Wall.
Conditional requirement of SglT for type IV pili function and S-motility in Myxococcus xanthus
Microbiology (Reading), 166(4), 349--358, 2020
INBREC. Yuan, X. Zhao, Z. Wang, T. Borg, T. Ye, Z. Khalpey, R. Runyan, Y. Shao and B. Gao.
Study of the Expression Transition of Cardiac Myosin Using Polarization-Dependent SHG Microscopy
Biophys J, 118(5), 1058--1066, 2020
INBRES. Buddenborg, B. Kamel, B. Hanelt, L. Bu, S. Zhang, G. Mkoji and E. Loker.
The in vivo transcriptome of Schistosoma mansoni in the prominent vector species Biomphalaria pfeifferi with supporting observations from Biomphalaria glabrata
PLoS Negl Trop Dis, 13(9), e0007013, 2019
INBREM. Chadiarakou, A. Sundararajan, I. Lindquist, G. DeFrancesca, M. Kwicklis, D. Lighthall, N. Farmer, M. Shuster and J. Mudge.
MRSA in the NICU: Outbreak or Coincidence?
National Center for Case Study Teaching in Science, http://sciencecases.lib.buffalo.edu/cs/collection/detail.asp?case_id=1002&id=1002, 2018
INBRE Science Tools in the ClassroomS. Scroggs, N. Grubaugh, J. Sena, A. Sundararajan, F. Schilkey, D. Smith, G. Ebel and K. Hanley.
Endless Forms: Within-Host Variation in the Structure of the West Nile Virus RNA Genome during Serial Passage in Bird Hosts
mSphere, 4(3), 2019
INBREK. Whitney, J. Mudge, D. Natvig, A. Sundararajan, W. Pockman, J. Bell, S. Collins and J. Rudgers.
Experimental drought reduces genetic diversity in the grassland foundation species Bouteloua eriopoda
Oecologia, 189(4), 1107--1120, 2019, DOI 10.1007/s00442-019-04371-7
INBREA. Sundararajan, H. Rane, T. Ramaraj, J. Sena, A. Howell, S. Bernardo, F. Schilkey and S. Lee.
Cranberry-derived proanthocyanidins induce a differential transcriptomic response within Candida albicans urinary biofilms
PLOS ONE, 13(8), e0201969, 2018, DOI 10.1371/journal.pone.0201969
INBRES. DeVore, C. Young, G. Li, A. Sundararajan, T. Ramaraj, J. Mudge, F. Schilkey, A. Muth, P. Thompson and B. Cherrington.
Histone Citrullination Represses MicroRNA Expression, Resulting in Increased Oncogene mRNAs in Somatolactotrope Cells
Molecular and Cellular Biology, 38(19), 2018, DOI 10.1128/mcb.00084-18
INBREH. Castillo, X. Li, F. Schilkey and G. Smith.
Transcriptome analysis reveals a stress response of Shewanella oneidensis deprived of background levels of ionizing radiation
PloS one, 13(5), e0196472, 2018, DOI 10.1371/journal.pone.0196472
INBREH. Tsujimoto, K. Hanley, A. Sundararajan, N. Devitt, F. Schilkey and I. Hansen.
Correction: Dengue virus serotype 2 infection alters midgut and carcass gene expression in the Asian tiger mosquito, Aedes albopictus
PLOS ONE, 13(1), e0192128, 2018, DOI 10.1371/journal.pone.0192128
INBRES. Buddenborg, L. Bu, S. Zhang, F. Schilkey, G. Mkoji and E. Loker.
Transcriptomic responses of Biomphalaria pfeifferi to Schistosoma mansoni: Investigation of a neglected African snail that supports more S. mansoni transmission than any other snail species
PLOS Neglected Tropical Diseases, 11(10), e0005984, 2017, DOI 10.1371/journal.pntd.0005984
INBRED. Neupane, B. Jacquez, A. Sundararajan, T. Ramaraj, F. Schilkey and E. Yukl.
Zinc-Dependent Transcriptional Regulation in Paracoccus denitrificans
Frontiers in Microbiology, 8, 2017, DOI 10.3389/fmicb.2017.00569
INBREH. Tsujimoto, K. Hanley, A. Sundararajan, N. Devitt, F. Schilkey and I. Hansen.
Dengue virus serotype 2 infection alters midgut and carcass gene expression in the Asian tiger mosquito, Aedes albopictus
PLOS ONE, 12(2), e0171345, 2017, DOI 10.1371/journal.pone.0171345
INBRER. Horn, T. Ramaraj, N. Devitt, F. Schilkey and D. Cowley.
De novo assembly of a tadpole shrimp (Triops newberryi) transcriptome and preliminary differential gene expression analysis
Molecular Ecology Resources, 17(2), 161--171, 2016, DOI 10.1111/1755-0998.12555
INBREJ. He, A. Sundararajan, N. Devitt, F. Schilkey, T. Ramaraj and C. Melançon.
Complete Genome Sequence of Streptomyces venezuelae ATCC 15439, Producer of the Methymycin/Pikromycin Family of Macrolide Antibiotics, Using PacBio Technology
Genome Announcements, 4(3), 2016, DOI 10.1128/genomea.00337-16
INBREV. Shah, . , S. Lambeth, T. Carson, J. Lowe, T. Ramaraj, J. Leff, L. Luo and C. Bell.
Composition Diversity and Abundance of Gut Microbiome in Prediabetes and Type 2 Diabetes
Journal of Diabetes and Obesity, 2(2), 108--114, 2015, DOI 10.15436/2376-0949.15.031
INBRED. Ramírez-Gordillo, T. Powers, J. Velkinburgh, C. Trujillo-Provencio, F. Schilkey and E. Serrano.
RNA-Seq and microarray analysis of the Xenopus inner ear transcriptome discloses orthologous OMIM® genes for hereditary disorders of hearing and balance
BMC Research Notes, 8(1), 2015, DOI 10.1186/s13104-015-1485-1
INBREY. Ogasawara, N. Torrez-Martinez, A. Aragon, B. Yackley, J. Weber, A. Sundararajan, T. Ramaraj, J. Edwards and C. Melançon.
High-Quality Draft Genome Sequence of Actinobacterium Kibdelosporangium sp. MJ126-NF4, Producer of Type II Polyketide Azicemicins, Using Illumina and PacBio Technologies
Genome Announcements, 3(2), 2015, DOI 10.1128/genomea.00114-15
INBREE. Schirtzinger, C. Andrade, N. Devitt, T. Ramaraj, J. Jacobi, F. Schilkey and K. Hanley.
Repertoire of virus-derived small RNAs produced by mosquito and mammalian cells in response to dengue virus infection
Virology, 476, 54--60, 2015, DOI 10.1016/j.virol.2014.11.019
INBRET. Ramaraj, S. Matyi, A. Sundararajan, I. Lindquist, N. Devitt, F. Schilkey, R. Lamichhane-Khadka, P. Hoyt, J. Mudge and J. Gustafson.
Draft Genome Sequences of Vancomycin-Susceptible Staphylococcus aureus Related to Heterogeneous Vancomycin-Intermediate S. aureus
Genome Announcements, 2(5), 2014, DOI 10.1128/genomea.01033-14
INBRES. Matyi, T. Ramaraj, A. Sundararajan, I. Lindquist, N. Devitt, F. Schilkey, R. Lamichhane-Khadka, P. Hoyt, J. Mudge and J. Gustafson.
Draft Genomes of Heterogeneous Vancomycin-Intermediate Staphylococcus aureus Strain MM66 and MM66 Derivatives with Altered Vancomycin Resistance Levels
Genome Announcements, 2(4), 2014, DOI 10.1128/genomea.00688-14
INBREM. Mukherjee, P. Kakarla, S. Kumar, E. Gonzalez, J. Floyd, M. Inupakutika, A. Devireddy, S. Tirrell, M. Bruns, G. He, I. Lindquist, A. Sundararajan, F. Schilkey, J. Mudge and M. Varela.
Comparative genome analysis of non-toxigenic non-O1 versus toxigenic O1 Vibrio cholerae
Genomics Discovery, 2(1), 1, 2014, DOI 10.7243/2052-7993-2-1
INBRES. Kumar, I. Lindquist, A. Sundararajan, C. Rajanna, J. Floyd, K. Smith, J. Andersen, G. He, R. Ayers, J. Johnson, J. Werdann, A. Sandoval, N. Mojica, F. Schilkey, J. Mudge and M. Varela.
Genome Sequence of Non-O1 Vibrio cholerae PS15
Genome Announcements, 1(1), 2013, DOI 10.1128/genomea.00227-12
INBREV. Pravosudov, T. Roth, M. Forister, L. Ladage, R. Kramer, F. Schilkey and A. Van.
Differential hippocampal gene expression is associated with climate-related natural variation in memory and the hippocampus in food-caching chickadees
Molecular ecology, 22(2), 397--408, 2013, DOI 10.1111/mec.12146
INBRET. PARCHMAN, Z. GOMPERT, J. MUDGE, F. SCHILKEY, C. BENKMAN and C. BUERKLE.
Genome-wide association genetics of an adaptive trait in lodgepole pine
Molecular Ecology, 21(12), 2991--3005, 2012, DOI 10.1111/j.1365-294x.2012.05513.x
INBREL. Nfonsam, C. Cano, J. Mudge, F. Schilkey and J. Curtiss.
Analysis of the transcriptomes downstream of Eyeless and the Hedgehog, Decapentaplegic and Notch signaling pathways in Drosophila melanogaster
PLoS One, 7(8), e44583, 2012, DOI 10.1371/journal.pone.0044583
INBREC. Bell, D. Dinwiddie, N. Miller, S. Hateley, E. Ganusova, J. Mudge, R. Langley, L. Zhang, C. Lee, F. Schilkey, V. Sheth, J. Woodward, H. Peckham, G. Schroth, R. Kim and S. Kingsmore.
Carrier testing for severe childhood recessive diseases by next-generation sequencing
Sci Transl Med, 3(65), 65ra4, 2011, DOI 10.1126/scitranslmed.3001756
INBRES. Baranzini, J. Mudge, J. Velkinburgh, P. Khankhanian, I. Khrebtukova, N. Miller, L. Zhang, A. Farmer, C. Bell, R. Kim, G. May, J. Woodward, S. Caillier, J. McElroy, R. Gomez, M. Pando, L. Clendenen, E. Ganusova, F. Schilkey, T. Ramaraj, O. Khan, J. Huntley, S. Luo, P. Kwok, T. Wu, G. Schroth, J. Oksenberg, S. Hauser and S. Kingsmore.
Genome, epigenome and RNA sequences of monozygotic twins discordant for multiple sclerosis
Nature, 464(7293), 1351--1356, 2010, DOI 10.1038/nature08990
INBRED. Brackney, J. Scott, F. Sagawa, J. Woodward, N. Miller, F. Schilkey, J. Mudge, J. Wilusz, K. Olson, C. Blair and []. others.
C6/36 Aedes albopictus cells have a dysfunctional antiviral RNA interference response
PLoS neglected tropical diseases, 4(10), e856, 2010, DOI 10.1371/journal.pntd.0000856
INBREJ. Kim, Y. Ju, H. Park, S. Kim, S. Lee, J. Yi, J. Mudge, N. Miller, D. Hong, C. Bell, H. Kim, I. Chung, W. Lee, J. Lee, S. Seo, J. Yun, H. Woo, H. Lee, D. Suh, S. Lee, H. Kim, M. Yavartanoo, M. Kwak, Y. Zheng, M. Lee, H. Park, J. Kim, O. Gokcumen, R. Mills, A. Zaranek, J. Thakuria, X. Wu, R. Kim, J. Huntley, S. Luo, G. Schroth, T. Wu, H. Kim, K. Yang, W. Park, H. Kim, G. Church, C. Lee, S. Kingsmore and J. Seo.
A highly annotated whole-genome sequence of a Korean individual
Nature, 460(7258), 1011--1015, 2009, DOI 10.1038/nature08211
INBREN. Miller, S. Kingsmore, A. Farmer, R. Langley, J. Mudge, J. Crow, A. Gonzalez, F. Schilkey, R. Kim, J. Van and []. others.
Management of high-throughput DNA sequencing projects: Alpheus
Journal of computer science and systems biology, 1, 132, 2008
INBRE© 2024 National Center for Genome Resources. Privacy Policy | Terms of Use
Privacy Policy
The National Center for Genome Resources, a New Mexico nonprofit corporation ("Company," "NCGR," or "we"), in the operation of this website, www.ncgr.org (the "Website") is committed to protecting the privacy of its online visitors (collectively, "our users" or, as applicable to yourself and your organization, "you").
We believe that maintaining privacy on the Web is very important and hope you will read this Privacy Policy carefully so that you will clearly understand both our commitment to you and your privacy and our method of collecting and using information.
This Privacy Policy only applies to transactions made, and data gathered, on this Website and associated email service, and does not apply to any other website.
By using this Website, communicating with us by email, or by otherwise submitting personal information to us, you agree to the terms of this Privacy Policy and give your consent to the collection, storage and use of personal information as explained in this Privacy Policy.
The term "personal information" refers to non-public information that personally relates to or identifies you, such as your name, password, age, gender, email address, postal mailing address, zip code, home/mobile telephone number, Social Security number and/or taxpayer identification number, and other similar information. If we combine or associate information from other sources with personal information that you provide directly to us through or in connection with our services, we will treat the combined information as personal information in accordance with this Privacy Policy.
Other information not treated as personal that may be collected on the Website may include, without limitation, website pages viewed, sites visited before visiting this Website, frequency of visits, clickstream data, browser type, operating system, organization name, articles, internet connection speed, presentations viewed, time spent viewing pages of our website or using certain features of our website, demographic data such as server locations, clickstream data, location services, server location, cookies existing on your computer, search criteria used and results, date and time of access or visits to our website, frequency of visits to our website, connection speed, and other information which does not specifically identify you.
OUR PLEDGE TO YOU
We use commercially reasonable best efforts to maintain the confidentiality, integrity and security of our users' personal information. Keeping user information secure, and using it only as our users agree, are matters of principle for NCGR. With this in mind, here is our commitment to each user:
- We will restrict employee access to user information to those who need to know in order to provide services to you;
- We will maintain commercial reasonable and customary security standards and procedures to protect information about you; and
- We will respond quickly to your request to correct inaccurate information.
UPDATES AND CHANGES TO PRIVACY POLICY
We may revise our Privacy Policy at any time. In the event of a change in this Privacy Policy, a revised Privacy Policy will promptly be posted to our Website, and an "Updated" date will be provided. Please revisit this page to familiarize yourself with changes to the Privacy Policy. You agree to accept posting of a revised Privacy Policy as described herein as actual notice to you of such revised Privacy Policy. Your continued use of our Website after such posting constitute consent to the collection and use of your information as described in the then-current Privacy Policy.
HOW AND WHY WE GATHER INFORMATION
If you register for an account for use of this Website, we collect certain personal information from you to open an account, transact business, communicate with you, verify your identity and fulfill legal and regulatory requirements. From time to time, we may request additional information (e.g., through surveys) to help us further assess your needs and preferences. If you choose to provide such information, during registration or otherwise, you are giving us permission to collect, store and use it consistent with this Privacy Policy.
We may also obtain your personal information from your transactions with us or other users through the services provided through this Website, or from third parties.
EMAIL COMMUNICATIONS
We may send email newsletters to our registered users. Registered users may subscribe or unsubscribe to an email newsletter at any time by changing their email preferences. On occasion, we may send emails to individuals who have provided us with their email address, informing them of events or promotions we think might be of interest to them. Email recipients may always opt out of any email category at any time by following the unsubscribe instructions included in the email message.
Emailing Us: We try to respond to email messages requiring a response in accordance with our internal policies. If you email us, your message and email address will be forwarded to the appropriate individual within NCGR. We may choose to save this information. We are pleased to hear from you. However, any message, material, information, ideas, concepts or other information sent to us by email will be treated as non-confidential and non-proprietary, and we will not be liable for delays or omissions in receiving or responding to email.
COOKIES AND BEACONS
When you visit the Website, whether or not you register for an account, we may send one or more cookies. "Cookies" are small text files containing a string of alphanumeric characters that may be placed on your web browser. Cookies make it easier for you to navigate our Website by, among other things, "remembering" your identity so that you do not have to input your password multiple times as you navigate between webpages on the Website and/or as you access the Website. This use of cookies for authentication (i.e., verifying that you are who you say you are) is an essential component of site security. You can set your web browser to inform you when cookies are set or to prevent cookies from being set.
We may also utilize web beacons and server logs. A "web beacon" is typically a transparent graphic image (usually 1 pixel x 1 pixel) that is placed on a site or in an email which allows the website to record the simple actions of the user opening the page that contains the beacon. "Server logs" can be either a single log file or several log files automatically created and maintained by a server of activity performed by the server, which can include information about any transaction you conduct with the server.
Please note that if you decline to use cookies, you may experience reduced functionality or slower site response times. Declining to use our authentication-related cookies may prevent you from using the Website altogether. You may also clear cookies from your computer via your web browser settings. You may also wish to use a Google Analytics opt-out web browser add- on. Information on this option is available at: http://support.google.com/analytics/bin/answer.py?hl=en&answer=2700409.
We or our service providers may also collect web surfing data related to your use of our services (e.g., information regarding which of our web pages you access, the frequency of such access, and your product and service preferences). This may be accomplished by using cookies, web beacons, page tags or similar tools. Such web surfing data may include your Internet Protocol (IP) address, browser type, internet service provider (ISP), referring or exit pages, click stream data, operating system and the dates and times that you visit the Website. Web surfing data and similar information may be used: for administrative purposes; to assess the usage, value and performance of our online products and services; and to improve your experience with our services.
HOW INFORMATION HELPS BOTH YOU AND US
Information about you plays a key role in our ability to succeed in our activities. It also helps us service your accounts and administer our activities. For example, we may use information about you to:
- Provide you with the services available through the Website;
- Establish and set up your account, issue an account number, and maintain your transaction history;
- Respond more accurately and efficiently to your requests;
- Identify opportunities to give you more convenience and control by developing new services that may benefit you;
- Verify your identity and contact information to help protect you and us from fraud;
- Comply with certain legal and regulatory requirements.
We generally use the information that you provide or that we collect to establish and enhance our relationship with you, and to operate, maintain, enhance, and provide our services and the Website. We may use such information to periodically provide you with information, newsletters or offers about features and services available through our services that may be of interest to you. We may also send information or offers to groups of Users on behalf of other Users or third parties. However, you will have the option to opt out of receiving such information.
We use aggregated information provided by or collected from our users to understand and analyze the usage trends and preferences of our users, to improve the way our services and the Website work and look, and to create new features and functionality. We may use aggregated information about our Users to generate statistics and maps that we deem helpful in the provision of our services or any part thereof. We do not and will not sell analytics that identify personal information of our users without written consent from the user.
SOCIAL MEDIA FEATURES
You may be able to log in to the Website using services such as Linkedin or Facebook Connect. These services will authenticate your identity and provide you the option to share certain personal information with us such as your name and email address to pre-populate our sign up form. Services like Facebook Connect give you the option to post information about your activities on this Website to your profile page to share with others within your network.
Our Website may also include Social Media Features such as the Facebook Like button, Twitter, and share buttons. These Features are interactive mini-programs and may collect your IP address, which page you are visiting on our site, and may set a cookie to enable the feature to function properly. Social media features and widgets are either hosted by a third party or hosted directly on our Website. Your interactions with these Features are governed by the Privacy Policy of the company providing them.
HOW AND WHY OUR COMPANY DISCLOSES YOUR INFORMATION TO THIRD PARTIES
We limit the sharing of personal information outside our Company. We do not sell, license, lease, or otherwise disclose your personal information to third parties, except as noted below:
- We may disclose your personal information when such disclosure is legally required or appropriate pursuant to any court orders, subpoenas or any regulations, including responding to court orders and subpoenas, cooperating with government agencies, other regulatory bodies, and law enforcement officials, performing background checks, resolving disputes or performing risk-management functions.
- We may share personal information with other companies and organizations who perform work for us under contract or sell products or services that complement our products and services.
- To help us improve our services, we may engage third parties to help us to carry out certain internal functions such as information management, account processing, client services, or other data collection relevant to our activities. Examples of the types of outside companies with which we may share information include companies that perform services for us, such as data processing, and companies that perform services on our behalf. Use of any personal information we share with these third parties is limited to the performance of the task we request. The third parties with which we share personal information are required to protect it in a manner similar to the way we protect your personal information.
- We may make certain automatically collected information about your interactions and activities on our services, such as the areas of interest to you, and your past activities, projects or proposals, publicly available on or through the services. Any such publicly available information will be accessible by other users.
- In the event that our Company is acquired by or merged with a third-party entity, we reserve the right to transfer or assign the information that we have collected from users as part of such merger, acquisition, sale, or other change of control. In such cases, we will provide you notice before your personal information is transferred to and becomes subject to the Privacy Policy of a different entity.
We further reserve the right to disclose any of your personal information as we believe appropriate or necessary to take precautions against liability, to investigate and defend against any third party claims or allegations, to assist government enforcement agencies, to protect the security or integrity of the services, or to protect the rights, property or personal safety of our Company, our users, or others.
We may also use and disclose personally identifiable information and non-personally identifiable information: to investigate and help prevent potentially unlawful activity or activities that threaten the integrity of our website or network; to protect and defend our rights or property or the rights or property of others; as required by courts or administrative agencies; and in connection with a financing, sale, merger, or reorganization of our activities or assets.
Any successor in interest to our activities would acquire the information we maintain, including personally identifiable information, and may alter the terms of this Privacy Policy.
We do not and will not sell any of your information, including non-personally identifiable or personally identifiable information, to any third party for purposes of advertising, soliciting, or telemarketing. We may use a third party service to collect anonymous visitor information like IP addresses, browser types (such as Firefox), referring pages, pages visited and time spent on a particular service or feature. We collect this information for statistical analysis of web page traffic patterns; to administer our service and servers; to allow for auditing of our services by some third parties who have that right; and for internal purposes to make marketing decisions.
OUR PRIVACY POLICY DOES NOT APPLY TO THIRD-PARTY ACTIVITIES OR SITES
The Website may provide links to third-party websites for your convenience and information. If you access those links, you will leave our Website. Any information submitted by you to a third party, will be controlled by that third party's Privacy Policy, which may differ from our own. This Privacy Policy does not cover the collection of information by cookies or other methods by such third party services or other third parties. We do not control how these third party services or third parties collect information or by what means such third party services or third parties may use their own cookies to collect information about you. We do not endorse, screen, or approve, and are not responsible for the privacy practices or the content of, other websites or services. We encourage you to review the privacy policy of any company before submitting your personal information.
KEEPING INFORMATION SAFE
We limit access to your personal information to those employees who have a legitimate need to access such information to provide you with our services. In keeping with industry standards and practices, we maintain commercially reasonable physical, electronic and procedural safeguards and controls to protect your information. The Website is built upon a secure infrastructure with multiple layers of protection and we use industry standard encryption technologies to safeguard your information.
We have security standards and procedures in place designed to prevent unauthorized access to your accounts and personal information. A key part of this process helps ensure that all information we have about you is accurate and up-to-date. If you ever discover inaccuracies in our data or if your personal information changes, notify us immediately.
The transmission of information via the Internet is not completely secure, and for this reason we cannot guarantee the security of information sent to us electronically. If we learn of a security systems breach, we may attempt to notify you electronically so that you can take appropriate protective steps. We may also post a notice on or through the Website in the event of a security breach. Depending on where you live, you may have a legal right to receive notice of a security breach in writing.
OPT-OUT POLICY
We may at times send you e-mail communications with marketing or promotional materials. If you prefer not to receive such marketing or promotional e-mails from us, you may unsubscribe completely by emailing us at: info@ncgr.org.
Please note that opt-out requests may take up to twenty-four (24) hours to process. Please also note that at times we may need to send you e-mail communications that are transactional in nature such as service or termination announcements or payment confirmations which are communications you will not be able to opt-out of.
If you would like us to remove your Personally Identifiable Information from our database, please send a request to: info@ncgr.org.
We are not responsible for removing your personal information from the lists of any third-party services or other third party who has previously been provided your information in accordance with this notice.
REVIEWING, CHANGING OR CORRECTING INFORMATION
You are solely responsible for helping us to maintain the accuracy and completeness of your personal and other information. We urge you to review your information regularly to ensure that it is correct and complete. If you believe that any of your information is incorrect, or if you have any questions regarding this Privacy Policy, please contact us.
You may, of course, decline to share any or all of your personal information with us or ask us to delete your personal information from our systems at any time, in which case we may not be able to provide to you some of the features and functionality found on or through the Website.
OUR COMMITMENT TO CHILDREN'S PRIVACY
We do not knowingly collect personal information on or through our services from persons under 13 years-of-age without their legal guardian's consent. If we learn that personal information has been collected from persons under 13 years-of-age through our services without their legal guardian's consent, then we will take the appropriate steps to delete this information. If you are a parent or guardian and discover that your child under the age of 13 has a registered account with the services or we have received any personally identifiable information of that child without your consent, you may alert us by contacting us.
INTERNATIONAL VISITORS
Our services may be accessed and/or used by users located outside the United States in accordance with our Terms of Use and other policies and procedures posted on the Website. If you choose to use the services from the European Union or other regions of the world with laws governing data collection and use that may differ from U.S. law, then please note that you are transferring your personal information outside of those regions to the United States and by providing your personal information on or through the Website you consent to that transfer.
APPLICABLE LAW AND JURISDICTION
This Privacy Notice shall be governed by, construed and entered in accordance with the laws of the State of New Mexico, United States of America, applicable to contracts deemed to be made within such state, without regard to choice of law or conflict of law provisions thereof. All disputes with respect to this Privacy Notice shall be brought and heard either in the state or federal courts in and for the state of New Mexico, United States of Americe. You consent to the in personam jurisdiction and venue of such courts. YOU HEREBY WAIVE YOUR RIGHT TO A TRIAL BY JURY WITH RESPECT TO ANY CLAIM, ACTION OR PROCEEDING, DIRECTLY OR INDIRECTLY, ARISING OUT OF, OR RELATING TO, THIS AGREEMENT TO THE FULLEST EXTENT PERMITTED BY LAW.
SECURITY
No data transmissions over the Internet can be guaranteed to be 100% secure. Consequently, we cannot ensure or warrant the security of any information you transmit to us and you understand that any information that you transfer to our Company is done at your own risk.
We make reasonable efforts to ensure security on our systems. We have put in place appropriate physical, electronic and administrative procedures to safeguard and secure the information we collect online. However, please note that this is not a guarantee that such information may not be accessed, disclosed, altered or destroyed by breach of our systems.
If we learn of a security systems breach we may attempt to notify you electronically so that you can take appropriate protective steps. By using the service or providing personally identifiable information to us you agree that we can communicate with you electronically regarding security, privacy and administrative issues relating to your use of our services. We may post a notice on our Webpage if a security breach occurs. We may also send an email to you at the email address you have provided to us in these circumstances. Depending on where you live, you may have a legal right to receive notice of a security breach in writing.
Contact Information
If you have any questions regarding this Privacy Policy, please contact: info@ncgr.org
.Effective November 4, 2019
Terms of Use
The National Center for Genome Resources ("NCGR") website (the "Website") is owned and managed by The National Center for Genome Resources, a New Mexico nonprofit corporation ("Owner," or "we" or "us").
THE PURPOSE OF THE WEBSITE IS TO SHARE INFORMATION WITH A PROFESSIONAL AND BUSINESS AUDIENCE CONCERNING GENOMIC DATA SCIENCE.
These Terms of Use are an agreement between Owner and each person who accesses or uses the Website (a "User," or "you"). By accessing, browsing, or using this service, User agrees to be bound by these Terms of Use. Owner may at any time revise these Terms of Use by updating this posting. User's continued use of the service following the posting of notice of a change will confirm User's acceptance of the change. IF YOU DO NOT ACCEPT THESE TERMS & CONDITIONS IN THEIR ENTIRETY PLEASE LEAVE THE SITE NOW.
Owner undertakes to provide accurate and up-to-date information it posts on the Website. However, each User should understand that all information obtained using the Website is subject to change, does not constitute professional advice or opinions, has not been tested or proven, and is provided "AS IS." Accordingly:
- THE USE OF THE INFORMATION AND ANY SUBMISSIONS MADE AVAILABLE ON THE WEBSITE IS AT YOUR OWN RISK;
- Owner shall not be responsible or liable for the accuracy, usefulness or availability of any information transmitted or made available via the Website, and User is solely responsible for any decisions made based on such information.
- Passing of time can render information contained in, or linked to, the Website stale. Owner are not responsible for any misimpressions which may result from the use of dated material. Owner does not undertake any duty to verify, update, supplement, correct, comment upon or modify any information contained in the Website or any other site to which it is linked.
You may restrict access to this site using content filtering software or by changing your computer settings (e.g. browser or operating system), as appropriate.
RULES AND RESTRICTIONS ON SUBMISSIONS
1. The Website may contain interactive services, including discussion groups, news groups, bulletin boards, chat rooms, blogs and other social networking features, such as the display of linked content from other sites, which may allow you to post, transmit or submit information, including writings, images, illustrations, audio recordings, and video recordings ("Submissions"). Users should exercise common sense and courtesy with all Submissions. Inappropriate Submissions, which Owner prohibits, would include, for example, comments or materials that:
- Are false or untrue in any material particular, or that, irrespective of falsity, directly, or by ambiguity, omission, or inference, or by the addition of irrelevant, scientific or technical matter, tend to create a misleading impression;
- Abuse, harass, stalk, threaten or otherwise violate the legal rights (such as rights of privacy and publicity) of others;
- Are obscene or indecent;
- Upload or attach files that contain software or other material protected by intellectual property laws (or by rights of privacy or publicity) unless you own or control the rights thereto or have received all necessary consents;
- Upload or attach files that contain viruses, corrupted files, or any other similar software or programs that may damage the operation of another's computer;
- Delete any author attributions, legal notices or proprietary designations or labels in any file that is uploaded;
- Falsify the origin or source of software or other material contained in a file that is uploaded; or
- Violate applicable federal, state or local laws or regulations.
2. Submissions may not include content or materials that violate the copyrights, trademark rights or other intellectual property rights of third parties.
3. Submissions may not contain unauthorized disclosures of proprietary or confidential information. DO NOT POST PERSONALLY IDENTIFIABLE INFORMATION (AS IMAGES OR TEXT) TO PUBLICLY VIEWABLE AREAS UNLESS YOU HAVE THE RIGHT TO DO SO AND CONSENT TO THE PUBLICATION OF THAT INFORMATION.
4. Users may not use the Website in a manner or for a purpose that could violate federal or state laws.
5. The purpose of the Website is strictly informational. Submissions may not include advertisements, promotions, solicitations, "spam," chain letters, surveys, marketing arrangements or the like.
6. Submissions may not include false or misleading representations of affiliation with any other person or entity. A User may not employ false identifiers to impersonate any person or entity or to misrepresent or disguise the true origin of any content.
7. Owner believes that anonymous postings are neither necessary for purposes of the Website, nor consistent with the professional level of dialogue expected. Therefore, the User's name (which must be provided) will be posted with the Submission.
8. Owner does not endorse, recommend or guarantee any Submission or any opinion, recommendation or advice expressed therein.
9. Users may not interfere with or disrupt the Website, networks or servers connected to the Website, such as by attempting to probe, scan or test the vulnerability of a system or network or to breach security or authentication measures, attempting to interfere with service to any user, host or network, such as by overloading, "flooding," "spamming," "mailbombing" or "crashing," sending unsolicited email, including promotions and/or advertising of products or services, or forging any TCP/IP packet header or any part of the header information in any email or newsgroup posting, or otherwise violating the regulations, policies or procedures of such networks or servers.
10. Users may not employ any type of bots that can disrupt the normal flow of dialogue, cause a screen to "scroll" faster than other users of the Website are able to type, show multiple screens, or otherwise act in a manner that negatively affects other users' ability to engage in real time exchanges.
11. Users may not use or attempt to use any engine, software, tool, agent or other device or mechanism (including browsers, spiders, robots, avatars or intelligent agents) to navigate or search the Website other than the search engine and search agents which Owner makes available on the Website and generally available third-party web browsers.
OWNER'S RIGHT TO MONITOR AND ADMINISTER THE WEBSITE
Owner reserves the right to monitor and administer the Website and, in its sole discretion, to block or remove any content posted to the Website. Owner reserves the right to disallow the use of any particular screen name or e-mail address, or to suspend or terminate any User's access or posting privileges at any time, including individual and group postings. While Owner reserves the right to do so, Owner gives no assurance it does or will do so, as it is not Owner's intention to edit or control content generally.
ACCOUNTS AND SECURITY
To use certain areas of the Website or related features, you may be asked to create an account with a username and password. You agree that the account information you provide us will be and remain accurate. You are responsible for maintaining the strict confidentiality of your account username and password. You are responsible for any activity using your account and password.
LINKED SITES
Owner does not review all of the sites linked to its Website ("Linked Sites") and is not responsible for the contents of any such Linked Site ("Linked Content"). The inclusion of any link does not imply endorsement by Owner of the Linked Site. Use of any such Linked Site or Linked Content is at the User's own risk.
To use some of the functionality of the Website you may be required to establish an account with a username and password with Linked Sites. As these are unaffiliated sites, we are not responsible for any username, password, or other information these sites may collect. If you are unable to establish accounts on these Linked Sites for any reason, you may not be able to fully utilize the functionality provided by the Site.
In addition to these Terms of Use, if Linked Content is displayed on the Website, the use thereof may be subject to separate terms of use provided by the Linked Site.
OWNERSHIP OF THE WEBSITE AND ITS CONTENTS AND ASSOCIATED TRADEMARKS
The brands, logos and names of specific products or services provided by third parties are owned by those third parties.
The content of the Website, including postings originated by Owner or its providers, and related artwork, graphics and photographic or audiovisual works, are protected by copyright and owned by Owner or third parties who provide such content to Owner. Except as permitted under U.S. Copyright laws, the Website and its contents may not be copied, reproduced, republished or sold, posted, transmitted, distributed, modified, or used for the creation of derivative works without Owner's or applicable third parties' prior written consent.
Owner, to the extent it owns such rights, grants User a non-exclusive, non-transferable, limited license to access, display and/or download a limited and temporary amount of content and pages available within the Website, solely on User's computer and for User's individual use.
Except for the permission expressly granted above to access, display, copy and download the Owner content and pages available within the Website, Owner reserves all rights in the Website and its contents. User may not "mirror" any content or information contained on the Website without Owner's prior written consent. User may not create links to the Website from other sites without Owner's prior written consent and compliance with all applicable laws.
Owner does not claim ownership of or copyrights in User Submissions. User understands that Submissions are not confidential and Owner will be free (without compensation to User) to use or disseminate such Submissions on an unrestricted basis for any purpose. User agrees that Submissions may be published, displayed, copied, distributed, downloaded, or transmitted by Owner or other Website participants, and User grants Owner and all other Users of the Website an irrevocable, unrestricted, perpetual, worldwide, royalty-free license to use, copy, reproduce, display, publish, distribute, transmit, adapt, modify or use for the creation of derivative works (including in digital form) such Submissions.
DISCLAIMERS
OWNER MAKES MAKE NO REPRESENTATION OR WARRANTY RELATING TO THE WEBSITE OR ANY INFORMATION AVAILABLE ON THE WEBSITE; ALL EXPRESS OR IMPLIED WARRANTIES OF ANY KIND, INCLUDING WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE, ARE HEREBY DISCLAIMED.
OWNER MAKES NO WARRANTY THAT THE WEBSITE, OR ANY COMPUTER, SERVER, DEVICE, SOFTWARE, OR OTHER TECHNOLOGY ASSOCIATED WITH THE WEBSITE, IS FREE OF VIRUSES, WORMS, OR OTHER ELEMENTS OR CODES THAT MANIFEST CONTAMINATING OR DESTRUCTIVE PROPERTIES. SOME JURISDICTIONS DO NOT ALLOW THE EXCLUSION OF WARRANTIES, SO THE ABOVE EXCLUSIONS MAY NOT APPLY TO YOU.
LIMITATIONS OF LIABILITY
NEITHER OWNER NOR ITS OFFICERS, DIRECTORS, EMPLOYEES, AGENTS, OR REPRESENTATIVES SHALL BE RESPONSIBLE FOR ANY LOSS OR DAMAGE OF ANY KIND ARISING FROM OR IN ANY WAY RELATING TO (A) THE USE OF OR INABILITY TO USE THE WEBSITE, (B) ERRORS IN OR OMISSIONS FROM WEBSITE CONTENT OR ANY LINKED CONTENT, (C) ANY THIRD PARTY WEB SITES OR CONTENT THEREIN DIRECTLY OR INDIRECTLY ACCESSED THROUGH LINKS IN ANY WEBSITE CONTENT OR LINKED CONTENT, (D) THE UNAVAILABILITY OF THE WEBSITE OR ANY LINKED SITE, OR (E) ANY USE OF THE WEBSITE OR ANY LINKED SITE OR RELIANCE BY THE USER ON ANY INFORMATION OR CONTENT CONTAINED THEREIN.
OWNER SHALL NOT BE LIABLE TO ANY USERS OR ANY OTHER PERSON FOR ANY DIRECT, SPECIAL, INDIRECT, INCIDENTAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES ARISING FROM OR IN ANY WAY RELATING TO THE FOREGOING, EVEN IF THEY HAVE BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGES OCCURRING.
IN NO EVENT MAY USER BRING ANY CLAIM OR CAUSE OF ACTION AGAINST OWNER MORE THAN ONE (1) YEAR AFTER SUCH CLAIM OR CAUSE OF ACTION ARISES.
REPRESENTATIONS BY USERS; INDEMNIFICATION
USER IS SOLELY RESPONSIBLE FOR THE CONTENTS OF HIS/HER SUBMISSIONS TO THE WEBSITE. USER REPRESENTS THAT HE/SHE HAS ALL RIGHTS NECESSARY TO POST THE INFORMATION, CONTENT OR MATERIALS SUBMITTED TO THE WEBSITE WITHOUT VIOLATING THE COPYRIGHTS OR ANY OTHER INTELLECTUAL PROPERTY RIGHTS OF THIRD PARTIES, AND THAT NO SUBMISSION BY THE USER WILL VIOLATE APPLICABLE LAWS OR THE RIGHTS OF THIRD PERSONS. USER HEREBY INDEMNIFIES AND AGREES TO HOLD HARMLESS OWNER AND ITS OFFICERS, DIRECTORS, SHAREHOLDERS, EMPLOYEES, AGENTS AND REPRESENTATIVES FROM ANY AND ALL CLAIMS ASSERTED AGAINST THEM AND ANY LIABILITY, LOSS, DAMAGE, COSTS OR EXPENSES (INCLUDING REASONABLE ATTORNEYS' FEES) INCURRED OR SUFFERED BY THEM IN CONNECTION WITH OR ARISING OUT OF USER'S ACTS OR OMISSIONS OR THE MATERIALS OR INFORMATION USER SUBMITS TO THE WEBSITE.
CHOICE OF LAW AND CONSENT TO FORUM
This Agreement will be interpreted and governed in all respects by the laws of the State of New Mexico, United States of America, without regard to its choice of laws rules. Any dispute arising under these Terms of Use or in connection with the User's use of the Website shall be subject to the exclusive jurisdiction of either the state or federal courts in and for New Mexico, and User and Owner hereby consent to the personal jurisdiction of such courts over them.
RESTRICTION, SUSPENSION AND TERMINATION
We may restrict, suspend, or terminate your access to the Site and/or your ability to avail of any of the services on the Website, including interactive services, at any time if we believe that you have breached these Terms of Use. Any such restriction, suspension, or termination will be without prejudice to any rights that we may have against you in respect of your breach of these Terms of Use. We may also remove the Website as a whole or any sections or features of the Website at any time.
Please note that we have the ability to trace your IP address and if necessary contact your internet service provider in the event of a suspected breach of these Terms of Use.
PROCEDURES FOR REQUESTING THE REMOVAL OF INFRINGING MATERIAL
Owner respect the intellectual property of others. If a person or organization (a "Copyright Owner") believes that his, her or its work has been copied on the Website in a way that constitutes copyright infringement, provide Owner the written information specified below. Please note that this procedure is exclusively for the Copyright Owner to notify Owner that copyrighted material of the Copyright Owner has been infringed. If a Copyright Owner believes that its own copyrighted work has been copied in a way that constitutes copyright infringement and is accessible via the Website, the Copyright Owner may notify Owner's copyright agent in accordance with the following procedures and the Digital Millennium Copyright Act of 1998 (DMCA).
For a complaint to be valid under the DMCA, the Copyright Owner must provide the following information when providing notice of the claimed copyright infringement: (1) a physical or electronic signature of a person authorized to act on behalf of the Copyright Owner; (2) identification of the copyrighted work or other intellectual property that the Copyright Owner owns and claims to have been infringed; (3) identification of the material that the Copyright Owner claims is infringing as well as information reasonably sufficient to permit Owner to locate the material on the Website; (4) the address, telephone number, and e-mail address of the Copyright Owner or its designee; (5) a statement by the Copyright Owner that the Copyright Owner as the complaining party has a good faith belief that use of the material in the manner complained of is not authorized by the Copyright Owner, its agent, or the law; and (6) a statement, made under penalty of perjury, that the information in the notification is accurate, and that the complaining party is authorized to act on behalf of the Copyright Owner of an exclusive right that is allegedly infringed. The foregoing information must be submitted as a written notification to the following Designated Agent:
- Site: www.ncgr.org
- Designated agent for infringement claims: Callum Bell, President
- Address:National Center for Genome Resources2935 Rodeo Park Drive EastSanta Fe, New Mexico 87505
- Telephone of designated agent: 505-982-7840
- E-mail of designated agent: cjb@ncgr.org
WE CAUTION YOU THAT UNDER FEDERAL LAW, IF YOU KNOWINGLY MISREPRESENT THAT ONLINE MATERIAL IS INFRINGING, YOU MAY BE SUBJECT TO CIVIL PENALTIES. THESE INCLUDE MONETARY DAMAGES, COURT COSTS, AND ATTORNEYS' FEES INCURRED BY US, BY ANY COPYRIGHT OWNER, OR BY ANY COPYRIGHT OWNER'S LICENSEE THAT IS INJURED AS A RESULT OF OUR RELYING UPON YOUR MISREPRESENTATION. YOU MAY ALSO BE SUBJECT TO CRIMINAL PROSECUTION FOR PERJURY.
This information should not be construed as legal advice. For further details on the information required for valid DMCA notifications, see 17 U.S.C. 512(c)(3).
NOTE: This information is provided exclusively for notifying the service providers referenced above that the Copyright Owner's own copyrighted material(s) might have been infringed. All other inquiries, including technical requests, reports of e-mail abuse and third party reports of piracy, will not receive a response through this process.
HOW TO CONTACT OWNER
Questions regarding the Terms of Use or any other aspect of the Website can be submitted in writing to: info@ncgr.org